Stem-loop bta-mir-1296

Accession

MI0010468

Description

Bos taurus bta-mir-1296 precursor miRNA

Literature search

6 open access papers mention bta-mir-1296
(10 sentences)

Sequence

30192 reads, 22.0 reads per million, 314 experiments

ccuaccuaacugggUUAGGGCCCUGGCUCCAUCUCCuuuaggaaaaccuucuguggggAGUGGGGCUUUGACCCUAACCUagcugggcugu
....((((.(((((((((((....(((((((.((((((..((((....))))..)))))))))))))....))))))))))).))))....

Structure

ccua    a           CCCU       U      ua    a 
    ccua cugggUUAGGG    GGCUCCA CUCCuu  ggaa a
    |||| |||||||||||    ||||||| ||||||  ||||  
    gggu gaUCCAAUCCC    UCGGGGU GAgggg  ucuu c
uguc    c           AGUU       -      ug    c 

Annotation confidence High

Genome context

28: 19489842-19489932 [-]

Mature bta-miR-1296-5p

• Accession: MIMAT0009964
• Description: Bos taurus bta-miR-1296-5p mature miRNA
• Sequence: 15 - UUAGGGCCCUGGCUCCAUCUCC - 36
• Evidence: not_experimental

Mature bta-miR-1296-3p

• Accession: MIMAT0050901
• Description: Bos taurus bta-miR-1296-3p mature miRNA
• Sequence: 59 - AGUGGGGCUUUGACCCUAACCU - 80
• Evidence: not_experimental

References

1. PubMed ID: 18945293
   Annotation of 390 bovine miRNA genes by sequence similarity with other species
   "Strozzi F, Mazza R, Malinverni R, Williams JL"
   "Anim Genet (2009) 40:125