Stem-loop bta-mir-219b

Accession

MI0032929

Description

Bos taurus bta-mir-219b precursor miRNA

Literature search

5 open access papers mention bta-mir-219b
(7 sentences)

Sequence

2393 reads, 1.0 reads per million, 226 experiments

agagcucagccacaGAUGUCCAGCCACAAUUCUCGguuggccgcagacucguacaAGAAUUGCGUUUGGACAAUCAGUggcgaagcuc
.(((((..(((((.(((((((((.(.((((((((((((.......))).))....))))))).).)))))).))).)))))..)))))

Structure

a     ca     a   -      C A       ----  -   gg 
 gagcu  gccac GAU GUCCAG C CAAUUCU    CG guu  c
 |||||  ||||| ||| |||||| | |||||||    || |||  c
 cucga  cggUG CUA CAGGUU G GUUAAGA    gc cag  g
-     ag     A   A      U C       acau  u   ac 

Annotation confidence High

Genome context

11: 98985277-98985364 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bta-mir-219b

Mature bta-miR-219b-5p

• Accession: MIMAT0051080
• Description: Bos taurus bta-miR-219b-5p mature miRNA
• Sequence: 15 - GAUGUCCAGCCACAAUUCUCG - 35
• Evidence: experimental ; Illumina [1]

Mature bta-miR-219b-3p

• Accession: MIMAT0040926
• Description: Bos taurus bta-miR-219b-3p mature miRNA
• Sequence: 56 - AGAAUUGCGUUUGGACAAUCAGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25458694
   Regulating life or death: potential role of microRNA in rescue of the corpus luteum
   "Maalouf SW, Liu WS, Albert I, Pate JL"
   "Mol Cell Endocrinol (2014) 398:78-88