Stem-loop bta-mir-2342

Accession

MI0011370

Description

Bos taurus bta-mir-2342 precursor miRNA

Sequence

12 reads, 4 reads per million, 12 experiments

ggagcuaggcguggagcuucuguagugguaguguuccacacCUCUGCGGAAGUUGGCGCUUUcgauuuggcuuu
.(((((((((((..(((((((((((.(((.(((...)))))).))))))))))).))))).......)))))).

Structure

g      -------     gg           u   a   u 
 gagcua       ggcgu  agcuucuguag ggu gug  
 ||||||       |||||  ||||||||||| ||| ||| u
 uucggu       UCGCG  UUGAAGGCGUC Cca cac  
u      uuagcUU     -G           U   -   c 

Annotation confidence Not enough data

Genome context

chr19: 40692256-40692329 [+]

Mature bta-miR-2342

• Accession: MIMAT0011877
• Description: Bos taurus bta-miR-2342 mature miRNA
• Sequence: 42 - CUCUGCGGAAGUUGGCGCUUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349