Stem-loop bta-mir-2342

Accession

MI0011370

Description

Bos taurus bta-mir-2342 precursor miRNA

Sequence

957 reads, 1.0 reads per million, 140 experiments

ggagcuaggcguggaGCUUCUGUAGUGGUAGUGUuccacacCUCUGCGGAAGUUGGCGCUUUcgauuuggcuuu
.(((((((((((..(((((((((((.(((.(((...)))))).))))))))))).))))).......)))))).

Structure

g      -------     gg           U   A   U 
 gagcua       ggcgu  aGCUUCUGUAG GGU GUG  
 ||||||       |||||  ||||||||||| ||| ||| u
 uucggu       UCGCG  UUGAAGGCGUC Cca cac  
u      uuagcUU     -G           U   -   c 

Annotation confidence Medium

Genome context

19: 39867956-39868029 [+]

Mature bta-miR-2342-5p

• Accession: MIMAT0050924
• Description: Bos taurus bta-miR-2342-5p mature miRNA
• Sequence: 16 - GCUUCUGUAGUGGUAGUGU - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2342-3p

• Accession: MIMAT0011877
• Description: Bos taurus bta-miR-2342-3p mature miRNA
• Sequence: 42 - CUCUGCGGAAGUUGGCGCUUU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349