Stem-loop bta-mir-2483

Accession

MI0011545

Description

Bos taurus bta-mir-2483 precursor miRNA mir-2483

Gene
family

RF04165; mir-2483

Literature search

3 open access papers mention bta-mir-2483
(8 sentences)

Sequence

471 reads, 4 reads per million, 64 experiments

gagugaaaaguucCGUCAACCAUCCAGCUGUUUGAggugaugcaaacAAACAUCUGGUUGGUUGAGAGAauuuuuuacuu
(((((((((((((..(((((((.((((.((((((.(......)...)))))).)))).)))))))..)))))))))))))

Structure

             CG       U    C      --A gu 
gagugaaaaguuc  UCAACCA CCAG UGUUUG   g  g
|||||||||||||  ||||||| |||| ||||||   |   
uucauuuuuuaAG  AGUUGGU GGUC ACAAAc   c  a
             AG       U    U      aaa gu 

Annotation confidence High

Genome context

chrX: 9234274-9234353 [-]

Mature bta-miR-2483-5p

• Accession: MIMAT0012075
• Description: Bos taurus bta-miR-2483-5p mature miRNA
• Sequence: 14 - CGUCAACCAUCCAGCUGUUUGA - 35
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2483-3p

• Accession: MIMAT0012076
• Description: Bos taurus bta-miR-2483-3p mature miRNA
• Sequence: 48 - AAACAUCUGGUUGGUUGAGAGA - 69
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026