Stem-loop bta-let-7e

Accession

MI0005455

Description

Bos taurus bta-let-7e precursor miRNA

Literature search

150 open access papers mention bta-let-7e
(645 sentences)

Sequence

1433507 reads, 706.0 reads per million, 320 experiments

cccgggcUGAGGUAGGAGGUUGUAUAGUUgaggaggacacccaaggagaucaCUAUACGGCCUCCUAGCUUUCCccagg
((.(((..(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))..))).))

Structure

  c   cU   G                U  -------  a g 
cc ggg  GAG UAGGAGGUUGUAUAGU ga       gg g a
|| |||  ||| |||||||||||||||| ||       || |  
gg ccC  UUC AUCCUCCGGCAUAUCa cu       cc c c
  a   CU   G                -  agaggaa  - a 

Annotation confidence High

Genome context

18: 57689058-57689136 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-let-7e

Mature bta-let-7e-5p

• Accession: MIMAT0004333
• Description: Bos taurus bta-let-7e-5p mature miRNA
• Sequence: 8 - UGAGGUAGGAGGUUGUAUAGUU - 29
• Evidence: experimental ; cloned [1]

Mature bta-let-7e-3p

• Accession: MIMAT0060917
• Description: Bos taurus bta-let-7e-3p mature miRNA
• Sequence: 53 - CUAUACGGCCUCCUAGCUUUCC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988