Stem-loop bta-mir-2400

Accession

MI0011441

Description

Bos taurus bta-mir-2400 precursor miRNA

Literature search

6 open access papers mention bta-mir-2400
(42 sentences)

Sequence

3210 reads, 2.0 reads per million, 230 experiments

gagggcugCCCGAGCGCAUGUGGCUGAGUGUggucccuuggcgcCCAGCACAGGCAGCUCGGACUGAaacccuc
(((((..(.((((((((.((((.(((.((((.(.....).)))).))))))).)).)))))).).....)))))

Structure

     ---cu C      -  A    G   A    g u 
gaggg     g CCGAGC GC UGUG CUG GUGU g c
|||||     | |||||| || |||| ||| |||| | c
cuccc     C GGCUCG CG ACAC GAC cgcg u c
     aaAGU A      A  G    -   C    g u 

Annotation confidence High

Genome context

27: 33462772-33462845 [-]

Mature bta-miR-2400-5p

• Accession: MIMAT0050932
• Description: Bos taurus bta-miR-2400-5p mature miRNA
• Sequence: 9 - CCCGAGCGCAUGUGGCUGAGUGU - 31
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2400-3p

• Accession: MIMAT0011956
• Description: Bos taurus bta-miR-2400-3p mature miRNA
• Sequence: 45 - CCAGCACAGGCAGCUCGGACUGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349