Stem-loop bta-let-7g

Accession

MI0005051

Description

Bos taurus bta-let-7g precursor miRNA

Literature search

149 open access papers mention bta-let-7g
(618 sentences)

Sequence

55416470 reads, 15050.0 reads per million, 321 experiments

aggcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauaaCUGUACAGGCCACUGCCUUGCc
.(((.((((((((.((((((((((((.....((((.((.((((....))))))..)))))))))))))))).)))))))))))

Structure

a   U        A            ugagg    -a  a    a 
 ggc GAGGUAGU GUUUGUACAGUU     gucu  ug uacc c
 ||| |||||||| ||||||||||||     ||||  || ||||  
 cCG UUCCGUCA CGGACAUGUCaa     uaga  ac augg c
-   -        C            -----    gg  -    c 

Annotation confidence High

Genome context

22: 48636407-48636489 [+]

Mature bta-let-7g-5p

• Accession: MIMAT0003838
• Description: Bos taurus bta-let-7g-5p mature miRNA
• Sequence: 5 - UGAGGUAGUAGUUUGUACAGUU - 26
• Evidence: experimental ; cloned [1-2]

Mature bta-let-7g-3p

• Accession: MIMAT0060920
• Description: Bos taurus bta-let-7g-3p mature miRNA
• Sequence: 62 - CUGUACAGGCCACUGCCUUGC - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343