Stem-loop bta-mir-2339

Accession

MI0011366

Description

Bos taurus bta-mir-2339 precursor miRNA

Literature search

3 open access papers mention bta-mir-2339
(6 sentences)

Sequence

183 reads, 9 reads per million, 53 experiments

aggucugggcuccugcugcccagucugaggucugcacucuuugccUCACUGGACCUAGCAGAGCUcccacuu
.(((..((((((.(((((.(((((..(((((...........))))))))))...)))))))))))..))).

Structure

a   cu      c     --c     cu     cugc 
 ggu  gggcuc ugcug   ccagu  gaggu    a
 |||  |||||| |||||   |||||  |||||    c
 uca  cUCGAG ACGAU   GGUCA  CUccg    u
u   cc      -     CCA     --     uuuc 

Annotation confidence Not enough data

Genome context

chr19: 32129951-32130022 [-]

Mature bta-miR-2339

• Accession: MIMAT0011873
• Description: Bos taurus bta-miR-2339 mature miRNA
• Sequence: 46 - UCACUGGACCUAGCAGAGCU - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349