Stem-loop bta-mir-218-2

Accession

MI0005017

Description

Bos taurus bta-mir-218-2 precursor miRNA

Literature search

6 open access papers mention bta-mir-218-2
(8 sentences)

Sequence

1227142 reads, 370.0 reads per million, 309 experiments

uUUGUGCUUGAUCUAACCAUGUGguggaacgauggaaacggaaCAUGGUUCUGUCAAGCACC
...(((((((((..((((((((..((............))..))))))))..))))))))).

Structure

uUU         CU        Gg  gaacg 
   GUGCUUGAU  AACCAUGU  ug     a
   |||||||||  ||||||||  ||      
   CACGAACUG  UUGGUACa  gc     u
--C         UC        ag  aaagg 

Annotation confidence Medium

Genome context

20: 554570-554631 [-]

Mature bta-miR-218-5p

• Accession: MIMAT0003798
• Description: Bos taurus bta-miR-218-5p mature miRNA
• Sequence: 2 - UUGUGCUUGAUCUAACCAUGUG - 23
• Evidence: experimental ; cloned [1,3-4]

Mature bta-miR-218-2-3p

• Accession: MIMAT0050838
• Description: Bos taurus bta-miR-218-2-3p mature miRNA
• Sequence: 44 - CAUGGUUCUGUCAAGCACC - 62
• Evidence: experimental ; cloned [1,3-4]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343