miRBase entry: bta-mir-2455

Stem-loop bta-mir-2455


Accession
MI0011512
Description
Bos taurus bta-mir-2455 precursor miRNA


Sequence

7 reads, 2 reads per million, 6 experiments
ccggugacucccugcuuccuaguucagaggcugccccucaccaggcUCUGUGCUCGGGGAGGCAGGGAgcccucgg
((((.(.((((((((((((((((.(((((.(((........))).))))).)))..))))))))))))).).))))

Structure
    u a             --   u     g   ccc 
ccgg g cucccugcuuccu  agu cagag cug   c
|||| | |||||||||||||  ||| ||||| |||    
ggcu c gAGGGACGGAGGG  UCG GUCUc gac   u
    c c             GC   U     g   cac 


Annotation confidence Not enough data
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Genome context
chr7: 18013236-18013311 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2455
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2455

Accession MIMAT0012037
Description Bos taurus bta-miR-2455 mature miRNA
Sequence 47 - UCUGUGCUCGGGGAGGCAGGGA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349