miRBase entry: bta-mir-2455

Stem-loop bta-mir-2455


Accession
MI0011512
Description
Bos taurus bta-mir-2455 precursor miRNA


Sequence

246 reads, 0.0 reads per million, 115 experiments
ccggugacucCCUGCUUCCUAGUUCAGAGGCugccccucaccaggcUCUGUGCUCGGGGAGGCAGGGAgcccucgg
((((.(.((((((((((((((((.(((((.(((........))).))))).)))..))))))))))))).).))))

Structure
    u a             --   U     G   ccc 
ccgg g cucCCUGCUUCCU  AGU CAGAG Cug   c
|||| | |||||||||||||  ||| ||||| |||    
ggcu c gAGGGACGGAGGG  UCG GUCUc gac   u
    c c             GC   U     g   cac 


Annotation confidence Medium
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Genome context
7: 16711356-16711431 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from bta-mir-2455
Name Accession Chromosome Start End Strand Confidence




Database links

Mature bta-miR-2455-5p

Accession MIMAT0050949
Description Bos taurus bta-miR-2455-5p mature miRNA
Sequence 11 - CCUGCUUCCUAGUUCAGAGGC - 31
Evidence experimental
Illumina [1]

Mature bta-miR-2455-3p

Accession MIMAT0012037
Description Bos taurus bta-miR-2455-3p mature miRNA
Sequence 47 - UCUGUGCUCGGGGAGGCAGGGA - 68
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349