Stem-loop bta-mir-2308

Accession

MI0011321

Description

Bos taurus bta-mir-2308 precursor miRNA

Literature search

1 open access papers mention bta-mir-2308
(1 sentences)

Sequence

1891 reads, 2.0 reads per million, 223 experiments

cucAGUCCUCUGCUAAAGCCCACCUgugcucccgccuggaaagUUGGGCUUGCAGCAGAGAGUAAggag
(((...((((((((.(((((((((.(.((....))).)).....)))))))..))))))).)....)))

Structure

   -AGU -       -A       -----  U u  u 
cuc    C CUCUGCU  AAGCCCA     CC g gc c
|||    | |||||||  |||||||     || | ||  
gag    G GAGACGA  UUCGGGU     gg c cg c
   gAAU A       CG       Ugaaa  u -  c 

Annotation confidence High

Genome context

14: 381366-381434 [+]

Mature bta-miR-2308-5p

• Accession: MIMAT0050916
• Description: Bos taurus bta-miR-2308-5p mature miRNA
• Sequence: 4 - AGUCCUCUGCUAAAGCCCACCU - 25
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2308-3p

• Accession: MIMAT0011820
• Description: Bos taurus bta-miR-2308-3p mature miRNA
• Sequence: 44 - UUGGGCUUGCAGCAGAGAGUAA - 65
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026