Stem-loop bta-mir-2284t

Accession

MI0011331

Description

Bos taurus bta-mir-2284t precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284t
(32 sentences)

Sequence

74 reads, 10 reads per million, 27 experiments

guuggccGAAACAUUCACUCGGGUUUUUccauagcaucuuaacagaaAAACUCGAAUGAAUGUUUUGGCcaac
(((((((((((((((((.(((((((((((...............))))))))))).)))))))))))))))))

Structure

                 C           cauagc 
guuggccGAAACAUUCA UCGGGUUUUUc      a
||||||||||||||||| |||||||||||      u
caacCGGUUUUGUAAGU AGCUCAAAaag      c
                 A           acaauu 

Annotation confidence High

Genome context

chr15: 39355496-39355568 [-]

Mature bta-miR-2284t-5p

• Accession: MIMAT0011831
• Description: Bos taurus bta-miR-2284t-5p mature miRNA
• Sequence: 8 - GAAACAUUCACUCGGGUUUUU - 28
• Evidence: experimental ; Illumina [1-2]

Mature bta-miR-2284t-3p

• Accession: MIMAT0011832
• Description: Bos taurus bta-miR-2284t-3p mature miRNA
• Sequence: 48 - AAACUCGAAUGAAUGUUUUGGC - 69
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026