miRBase entry: bta-mir-1843

Stem-loop bta-mir-1843


Accession
MI0011471
Description
Bos taurus bta-mir-1843 precursor miRNA


Sequence

647 reads, 1.0 reads per million, 74 experiments
guAAGCUUCGUGGUCUCUGUCUUGCCcggacagccuucggagggcaagucagcaggucaggaagcuagc
((.((((((.(((((((((.(((((((..............))))))).))).)))))).)))))).))

Structure
  A      G      -   U       ggacag 
gu AGCUUC UGGUCU CUG CUUGCCc      c
|| |||||| |||||| ||| |||||||       
cg ucgaag acugga gac gaacggg      c
  a      g      c   u       aggcuu 


Annotation confidence Not enough data
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Genome context
4: 92988123-92988191 [-]

Database links

Mature bta-miR-1843-5p

Accession MIMAT0011990
Description Bos taurus bta-miR-1843-5p mature miRNA
Sequence 3 - AAGCUUCGUGGUCUCUGUCUUGCC - 26
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 19633723
    Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
    Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
    PLoS One (2009) 4:e6349