Stem-loop bta-mir-449d

Accession

MI0011447

Description

Bos taurus bta-mir-449d precursor miRNA

Literature search

6 open access papers mention bta-mir-449d
(13 sentences)

Sequence

2074 reads, 2.0 reads per million, 117 experiments

uguccuguccaugucGAAGGCUGUGUGCUGUGGAGgggagccuucugggccgagagacacacgaccugggcugca
......(((((.((((...(((.(..(((..(((((....)))))..)))..).)).)...)))).)))))....

Structure

uguccu     u    AAG -  G GU   GU     g 
      gucca gucG   G CU U  GCU  GGAGg g
      ||||| ||||   | || |  |||  |||||  
      cgggu cagc   c ga a  cgg  cuucc a
--acgu     c    aca a  g gc   gu     g 

Annotation confidence Not enough data

Genome context

29: 24963163-24963237 [-]

Mature bta-miR-449d-5p

• Accession: MIMAT0011962
• Description: Bos taurus bta-miR-449d-5p mature miRNA
• Sequence: 16 - GAAGGCUGUGUGCUGUGGAG - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349