Stem-loop bta-mir-2439

Accession

MI0011492

Description

Bos taurus bta-mir-2439 precursor miRNA

Literature search

1 open access papers mention bta-mir-2439
(1 sentences)

Sequence

249 reads, 1.0 reads per million, 79 experiments

gucuugccgucUCUGGCCUGGCUGAUGAUCUCAUaccuugauggugaUAUCAGAAGACAGGUAGGCAGAcggaccgac
(((...((((((((.(((((.((..((((.((..(((.....))))).))))..)).))))).)).))))))...)))

Structure

   uug      -  G     G  GA    C  AU   u 
guc   ccgucU CU GCCUG CU  UGAU UC  acc u
|||   |||||| || ||||| ||  |||| ||  ||| g
cag   ggcAGA GG UGGAC GA  ACUA ag  ugg a
   cca      C  A     A  AG    U  --   u 

Annotation confidence High

Genome context

5: 111845858-111845935 [-]

Mature bta-miR-2439-5p

• Accession: MIMAT0012013
• Description: Bos taurus bta-miR-2439-5p mature miRNA
• Sequence: 12 - UCUGGCCUGGCUGAUGAUCUCAU - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2439-3p

• Accession: MIMAT0012014
• Description: Bos taurus bta-miR-2439-3p mature miRNA
• Sequence: 48 - UAUCAGAAGACAGGUAGGCAGA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349