Stem-loop bta-mir-2436

Accession

MI0011487

Description

Bos taurus bta-mir-2436 precursor miRNA

Sequence

722 reads, 1.0 reads per million, 146 experiments

agcagggugCGGCGCAGCUGUCGGGAGGGCGcguccccguccccgUCCCCGCCCGACCGCCUCGCCcaacccucu
((.(((((..((((..((.((((((.(((.(((..........))).))).)))))).))..))))..)))))))

Structure

  c     gC    CA  U      A   C   uccc 
ag agggu  GGCG  GC GUCGGG GGG Gcg    c
|| |||||  ||||  || |||||| ||| |||     
uc uccca  CCGC  CG CAGCCC CCC Ugc    g
  -     ac    UC  C      G   C   cccu 

Annotation confidence Medium

Genome context

5: 83828933-83829007 [-]

Mature bta-miR-2436-5p

• Accession: MIMAT0012008
• Description: Bos taurus bta-miR-2436-5p mature miRNA
• Sequence: 10 - CGGCGCAGCUGUCGGGAGGGCG - 31
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2436-3p

• Accession: MIMAT0012009
• Description: Bos taurus bta-miR-2436-3p mature miRNA
• Sequence: 46 - UCCCCGCCCGACCGCCUCGCC - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349