Stem-loop bta-mir-2436

Accession

MI0011487

Description

Bos taurus bta-mir-2436 precursor miRNA

Sequence

17 reads, 7 reads per million, 10 experiments

agcagggugCGGCGCAGCUGUCGGGAGGGCGcguccccguccccgucCCCGCCCGACCGCCUCGCCCAAcccucu
((.(((((..((((..((.((((((.(((.(((..........))).))).)))))).))..))))..)))))))

Structure

  c     gC    CA  U      A   C   uccc 
ag agggu  GGCG  GC GUCGGG GGG Gcg    c
|| |||||  ||||  || |||||| ||| |||     
uc ucccA  CCGC  CG CAGCCC CCC ugc    g
  -     AC    UC  C      G   c   cccu 

Annotation confidence Not enough data

Genome context

chr5: 84472387-84472461 [-]

Mature bta-miR-2436-5p

• Accession: MIMAT0012008
• Description: Bos taurus bta-miR-2436-5p mature miRNA
• Sequence: 10 - CGGCGCAGCUGUCGGGAGGGCG - 31
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2436-3p

• Accession: MIMAT0012009
• Description: Bos taurus bta-miR-2436-3p mature miRNA
• Sequence: 48 - CCCGCCCGACCGCCUCGCCCAA - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349