Stem-loop bta-mir-2284u

Accession

MI0011387

Description

Bos taurus bta-mir-2284u precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284u
(32 sentences)

Sequence

21 reads, 2 reads per million, 8 experiments

gccaacugcuaggagcccgacacguacgcuaggggcuggcccAAAAGUUCGUUCGGUUUUUCUgcccaauguuggc
((((((.((.(((((.((((.(((.((....(((.....)))....)).)))))))..))))))).....))))))

Structure

      ----u  u     -c    c   u  gcua   g 
gccaac     gc aggag  ccga acg ac    ggg c
||||||     || |||||  |||| ||| ||    ||| u
cgguug     cg UCUUU  GGCU UGC UG    ccc g
      uaacc  -     UU    -   U  AAAA   g 

Annotation confidence Not enough data

Genome context

chr2: 131328372-131328447 [+]

Mature bta-miR-2284u

• Accession: MIMAT0011895
• Description: Bos taurus bta-miR-2284u mature miRNA
• Sequence: 43 - AAAAGUUCGUUCGGUUUUUCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349