Stem-loop bta-mir-2387

Accession

MI0011427

Description

Bos taurus bta-mir-2387 precursor miRNA mir-2387

Gene
family

RF03475; mir-2387

Literature search

2 open access papers mention bta-mir-2387
(2 sentences)

Sequence

31992 reads, 15.0 reads per million, 229 experiments

agcguggagggccUGGAAGGCCUGGCUUUGCAGCGUggacuggacCCUGCAGACCCGGCCUUGGCAagcccuuccgcu
((((.(((((((.((.((((((.((.(((((((.((.......)).))))))))).))))))..)).)))))))))))

Structure

    u       c  -G      U  C       C  gg 
agcg ggagggc UG  AAGGCC GG UUUGCAG GU  a
|||| ||||||| ||  |||||| || ||||||| ||  c
ucgc cuucccg AC  UUCCGG CC AGACGUC ca  u
    -       a  GG      C  -       C  gg 

Annotation confidence High

Genome context

25: 32930343-32930420 [-]

Mature bta-miR-2387-5p

• Accession: MIMAT0011939
• Description: Bos taurus bta-miR-2387-5p mature miRNA
• Sequence: 14 - UGGAAGGCCUGGCUUUGCAGCGU - 36
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2387-3p

• Accession: MIMAT0050930
• Description: Bos taurus bta-miR-2387-3p mature miRNA
• Sequence: 46 - CCUGCAGACCCGGCCUUGGCA - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349