Stem-loop bta-mir-1468

Accession

MI0012207

Description

Bos taurus bta-mir-1468 precursor miRNA mir-1468

Gene
family

RF03313; mir-1468

Literature search

3 open access papers mention bta-mir-1468
(3 sentences)

Sequence

947668 reads, 727.0 reads per million, 320 experiments

guugaagaggugggugguuuCUCCGUUUGCCUGUUUUGCUGAuguucauuugacuuauucucAGCAAAAUAAGCAAAUGGAAAauucauccaucaac
........(((((((((.((.(((((((((.(((((((((((..................))))))))))).))))))))).)).)))))))))...

Structure

guugaaga         u  C         C           uguucauu 
        ggugggugg uu UCCGUUUGC UGUUUUGCUGA        u
        ||||||||| || ||||||||| |||||||||||         
        cuaccuacu aA AGGUAAACG AUAAAACGAcu        g
-----caa         u  A         A           cuuauuca 

Annotation confidence High

Genome context

X: 96454651-96454747 [+]

Mature bta-miR-1468-5p

• Accession: MIMAT0013592
• Description: Bos taurus bta-miR-1468-5p mature miRNA
• Sequence: 21 - CUCCGUUUGCCUGUUUUGCUGA - 42
• Evidence: experimental ; cloned [1], Illumina [2]

Mature bta-miR-1468-3p

• Accession: MIMAT0050956
• Description: Bos taurus bta-miR-1468-3p mature miRNA
• Sequence: 63 - AGCAAAAUAAGCAAAUGGAAA - 83
• Evidence: experimental ; cloned [1], Illumina [2]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90


2. PubMed ID: 21912509
   Solexa sequencing of novel and differentially expressed microRNAs in testicular and ovarian tissues in Holstein cattle
   "Huang J, Ju Z, Li Q, Hou Q, Wang C, Li J, Li R, Wang L, Sun T, Hang S, Gao Y, Hou M, Zhong J"
   "Int J Biol Sci (2011) 7:1016-1026