Stem-loop bta-mir-2284k

Accession

MI0011400

Description

Bos taurus bta-mir-2284k precursor miRNA

Gene family

MIPF0000747; mir-2284

Literature search

13 open access papers mention bta-mir-2284k
(32 sentences)

Sequence

25 reads, 5 reads per million, 12 experiments

aguugaccaGAAAAGUUCGGUCGGGUUUUUcugcaacaucuaaugaaaaaaccaaaagaacuuuuuggccaccu
((.((.(((((((.((((....((..(((((.............)))))..))....))))))))))).)).))

Structure

  u  a       A    GGUC  GU     ugcaa 
ag ug ccaGAAA GUUC    GG  UUUUc     c
|| || ||||||| ||||    ||  |||||     a
uc ac gguuuuu caag    cc  aaaag     u
  c  c       -    aaaa  aa     uaauc 

Annotation confidence Not enough data

Genome context

chr21: 70380569-70380642 [-]

Mature bta-miR-2284k

• Accession: MIMAT0011907
• Description: Bos taurus bta-miR-2284k mature miRNA
• Sequence: 10 - GAAAAGUUCGGUCGGGUUUUU - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349