Stem-loop bta-mir-2471

Accession

MI0011531

Description

Bos taurus bta-mir-2471 precursor miRNA

Sequence

6 reads, 1 reads per million, 3 experiments

gcaugGAGGAUCUGUCUAAUCUCAGAGGgcauuuuugagcauuuccUCUGAUGAAGACAGCCCUGCUugc
(((.(.(((..((((((..(((((((((((........))....))))))).)))))))).))).).)))

Structure

   u G   AU      AA  -       ----  auu 
gca g AGG  CUGUCU  UC UCAGAGG    gc   u
||| | |||  ||||||  || |||||||    ||    
cgu C UCC  GACAGA  AG AGUCUcc    cg   u
   U G   -C      --  U       uuua  agu 

Annotation confidence Not enough data

Genome context

chr8: 40689733-40689802 [+]

Mature bta-miR-2471-5p

• Accession: MIMAT0012061
• Description: Bos taurus bta-miR-2471-5p mature miRNA
• Sequence: 6 - GAGGAUCUGUCUAAUCUCAGAGG - 28
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2471-3p

• Accession: MIMAT0012062
• Description: Bos taurus bta-miR-2471-3p mature miRNA
• Sequence: 47 - UCUGAUGAAGACAGCCCUGCU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349