Stem-loop bta-mir-2478

Accession

MI0011540

Description

Bos taurus bta-mir-2478 precursor miRNA

Literature search

6 open access papers mention bta-mir-2478
(39 sentences)

Sequence

3177 reads, 45 reads per million, 69 experiments

guugggggucgguggugagcaagcagagacuacauagguugccuuGUAUCCCACUUCUGACACCAuguauugucaac
(((((.(((..((((((((.(((..(.((.((((.(((...))))))))))..)))))..))))))..))).)))))

Structure

     g   cg      --  c   ca a  c    u   u 
guugg ggu  guggug  ag aag  g ga uaca agg  
||||| |||  ||||||  || |||  | || |||| ||| u
caacu uua  uACCAC  UC UUC  C CU AUGu ucc  
     g   ug      AG  -   AC -  -    -   g 

Annotation confidence Not enough data

Genome context

chr9: 28165967-28166043 [-]

Mature bta-miR-2478

• Accession: MIMAT0012070
• Description: Bos taurus bta-miR-2478 mature miRNA
• Sequence: 46 - GUAUCCCACUUCUGACACCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349