Stem-loop bta-mir-140

Accession

MI0005010

Description

Bos taurus bta-mir-140 precursor miRNA mir-140

Gene
family

RF00678; mir-140

Literature search

17 open access papers mention bta-mir-140
(38 sentences)

Sequence

377574 reads, 1502 reads per million, 76 experiments

ucucucuguguccugccagugguuuuacccuaugguagguuacgucaugcuguucUACCACAGGGUAGAACCACGGAcaggauaccggggcacc
..((((.((((((((((.(((((((((((((.(((((((.((.((...)))).))))))).))))))))))))))).)))))))).))))....

Structure

--uc    u        -  a             a       u  c  c 
    ucuc guguccug cc gugguuuuacccu ugguagg ua gu  
    |||| |||||||| || ||||||||||||| ||||||| || || a
    gggg cauaggac GG CACCAAGAUGGGA ACCAUcu gu cg  
ccac    c        A  -             C       u  -  u 

Annotation confidence High

Genome context

chr18: 37196457-37196550 [+]

Mature bta-miR-140

• Accession: MIMAT0003789
• Description: Bos taurus bta-miR-140 mature miRNA
• Sequence: 56 - UACCACAGGGUAGAACCACGGA - 77
• Evidence: experimental ; cloned [1-2], Array [3], qRT-PCR [3]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19170227
   Identification and expression profiling of microRNAs during bovine oocyte maturation using heterologous approach
   "Tesfaye D, Worku D, Rings F, Phatsara C, Tholen E, Schellander K, Hoelker M"
   "Mol Reprod Dev (2009) 76:665-677