Stem-loop bta-mir-2399

Accession

MI0011440

Description

Bos taurus bta-mir-2399 precursor miRNA

Literature search

2 open access papers mention bta-mir-2399
(2 sentences)

Sequence

77 reads, 1 reads per million, 46 experiments

guaauccucacaCUUUCUGUAGCUGUUGGAACUAuggugcauuguggUUCUAACAACUACAGAAAGUGUgaaaaucac
.......(((((((((((((((.((((((((((((........)))))))))))).))))))))))))))).......

Structure

guaaucc               C            ggu 
       ucacaCUUUCUGUAG UGUUGGAACUAu   g
       ||||||||||||||| ||||||||||||    
       agUGUGAAAGACAUC ACAAUCUUggug   c
cacuaaa               A            uua 

Annotation confidence Not enough data

Genome context

chr27: 25852073-25852150 [+]

Mature bta-miR-2399-5p

• Accession: MIMAT0011954
• Description: Bos taurus bta-miR-2399-5p mature miRNA
• Sequence: 13 - CUUUCUGUAGCUGUUGGAACUA - 34
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2399-3p

• Accession: MIMAT0011955
• Description: Bos taurus bta-miR-2399-3p mature miRNA
• Sequence: 48 - UUCUAACAACUACAGAAAGUGU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349