Stem-loop bta-mir-2454

Accession

MI0011511

Description

Bos taurus bta-mir-2454 precursor miRNA

Literature search

2 open access papers mention bta-mir-2454
(5 sentences)

Sequence

79 reads, 13 reads per million, 34 experiments

cccugugaCUGGGGGCUGCCAGGCAGGAGGCguggcuccuggugUCUCCUCUGGCCGCUCUCCUccccaggg
(((((.....((((((.(((((..(((((((((........)))))))))))))).)))))).....)))))

Structure

     ugaCU      U     GC         ggc 
cccug     GGGGGC GCCAG  AGGAGGCgu   u
|||||     |||||| |||||  |||||||||    
gggac     CUCUCG CGGUC  UCCUCUgug   c
     cccUC      C     --         guc 

Annotation confidence High

Genome context

chr7: 15988170-15988241 [-]

Mature bta-miR-2454-5p

• Accession: MIMAT0012035
• Description: Bos taurus bta-miR-2454-5p mature miRNA
• Sequence: 9 - CUGGGGGCUGCCAGGCAGGAGGC - 31
• Evidence: experimental ; Illumina [1]

Mature bta-miR-2454-3p

• Accession: MIMAT0012036
• Description: Bos taurus bta-miR-2454-3p mature miRNA
• Sequence: 45 - UCUCCUCUGGCCGCUCUCCU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19633723
   Repertoire of bovine miRNA and miRNA-like small regulatory RNAs expressed upon viral infection
   Glazov EA, Kongsuwan K, Assavalapsakul W, Horwood PF, Mitter N, Mahony TJ
   PLoS One (2009) 4:e6349