Stem-loop bta-mir-10b

Accession

MI0005052

Description

Bos taurus bta-mir-10b precursor miRNA

Literature search

127 open access papers mention bta-mir-10b
(552 sentences)

Sequence

44258655 reads, 30971.0 reads per million, 321 experiments

cagugacguugucuauauaUACCCUGUAGAACCGAAUUUGUGugguauccauguagucACAGAUUCGAUUCUAGGGGAAUAuauggucgaugcaaaaac
...((.(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).))))))).....

Structure

--cag  a     u        A    G     C          u g   c 
     ug cguug cuauauaU CCCU UAGAA CGAAUUUGUG g uau c
     || ||||| |||||||| |||| ||||| |||||||||| | |||  
     ac guagc gguauAUA GGGG AUCUU GCUUAGACAc u aug a
caaaa  -     u        A    -     A          - g   u 

Annotation confidence High

Genome context

2: 20762743-20762841 [-]

Mature bta-miR-10b-5p

• Accession: MIMAT0003839
• Description: Bos taurus bta-miR-10b-5p mature miRNA
• Sequence: 20 - UACCCUGUAGAACCGAAUUUGUG - 42
• Evidence: experimental ; cloned [1-2]

Mature bta-miR-10b-3p

• Accession: MIMAT0050795
• Description: Bos taurus bta-miR-10b-3p mature miRNA
• Sequence: 59 - ACAGAUUCGAUUCUAGGGGAAUA - 81
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988