Stem-loop bta-mir-125b-1

Accession

MI0004753

Description

Bos taurus bta-mir-125b-1 precursor miRNA

Literature search

55 open access papers mention bta-mir-125b-1
(176 sentences)

Sequence

8429603 reads, 4419.0 reads per million, 321 experiments

cgcgcgccucucaaUCCCUGAGACCCUAACUUGUGAuguuuaccguuuaaauccACGGGUUAGGCUCUUGGGAGCUgcgagucgcgcc
.(((((.(((.((.((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))..)).))).))))).

Structure

c     c   u  -a    U    C           Au     c 
 gcgcg cuc ca  UCCC GAGA CCUAACUUGUG  guuua c
 ||||| ||| ||  |||| |||| |||||||||||  ||||| g
 cgcgc gag gU  AGGG UUCU GGAUUGGGCAc  uaaau u
c     u   c  CG    -    C           -c     u 

Annotation confidence High

Genome context

15: 32763901-32763988 [-]

Mature bta-miR-125b-5p

• Accession: MIMAT0003539
• Description: Bos taurus bta-miR-125b-5p mature miRNA
• Sequence: 15 - UCCCUGAGACCCUAACUUGUGA - 36
• Evidence: experimental ; cloned [1-2]

Mature bta-miR-125b-1-3p

• Accession: MIMAT0060935
• Description: Bos taurus bta-miR-125b-1-3p mature miRNA
• Sequence: 55 - ACGGGUUAGGCUCUUGGGAGCU - 76
• Evidence: experimental ; cloned [1-2]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43


2. PubMed ID: 17306260
   Identification and characterization of microRNAs from the bovine adipose tissue and mammary gland
   "Gu Z, Eleswarapu S, Jiang H"
   "FEBS Lett (2007) 581:981-988


3. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343