Stem-loop bta-mir-215

Accession

MI0005016

Description

Bos taurus bta-mir-215 precursor miRNA mir-192

Gene
family

RF00130; mir-192

Literature search

9 open access papers mention bta-mir-215
(20 sentences)

Sequence

2234462 reads, 18169 reads per million, 74 experiments

uguacaggaaaAUGACCUAUGAAUUGACAGACAacgugacuaagucugucugucauuucuguaggccaauguucuguau
.((((((((...((.((((((((.(((((((((((........)).))))))))).))).))))).))...))))))))

Structure

u        aaA  A     -   U         -  gug 
 guacagga   UG CCUAU GAA UGACAGACA ac   a
 ||||||||   || ||||| ||| ||||||||| ||    
 uaugucuu   ac ggaug cuu acugucugu ug   c
-        gua  c     u   u         c  aau 

Annotation confidence High

Genome context

chr16: 24404933-24405011 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bta-mir-215

Mature bta-miR-215

• Accession: MIMAT0003797
• Description: Bos taurus bta-miR-215 mature miRNA
• Sequence: 12 - AUGACCUAUGAAUUGACAGACA - 33
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 17105755
   Discovery and profiling of bovine microRNAs from immune-related and embryonic tissues
   "Coutinho LL, Matukumalli LK, Sonstegard TS, Van Tassell CP, Gasbarre LC, Capuco AV, Smith TP"
   "Physiol Genomics (2007) 29:35-43