Search results

mir-192 family in Rfam (RF00130)

Summary
This family represents the human microRNA (miRNA) precursors mir-192 and mir-215. Animal miRNAs are transcribed as ~70nt precursors and subsequently processed by the Dicer enzyme to give a ~22nt product. In this case the mature sequence comes from the 5' arm of the precursor. The extents of the hairpin precursors are not generally known and are estimated based on hairpin prediction. The products are thought to have regulatory roles through complementarity to mRNA. The involvement of Dicer in miRNA processing suggests a relationship with the phenomenon of RNA interference. miRNAs are numbered based on the sequence of the mature RNA.
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5'

There are 48 hairpins in the mir-192 family

Name Accession RPM Chromosome Start End Strand Confidence
hsa-mir-192 MI0000234 1383 chr11 64891137 64891246 - High
hsa-mir-215 MI0000291 146 chr1 220117853 220117962 - -
mmu-mir-192 MI0000551 3462 chr19 6264844 6264932 + High
rno-mir-192 MI0000935 35899 chr1 221634971 221635080 + High
mmu-mir-215 MI0000974 1085 chr1 185313581 185313692 + High
gga-mir-215 MI0001203 140 chr3 18823159 18823263 + -
dre-mir-192 MI0001371 162 chr10 27063354 27063438 + High
mml-mir-215 MI0003025 133 chr1 146241256 146241365 + -
ptr-mir-215 MI0003027 - chr1 199161361 199161470 - -
ppy-mir-215 MI0003029 - chr1 29611880 29611989 + -
ggo-mir-215 MI0003031 - chr1 200131702 200131811 - -
mne-mir-215 MI0003033 - None None -
fru-mir-192 MI0003257 - HE602549.1 7517752 7517833 - -
tni-mir-192 MI0003258 - 7 7655502 7655584 + -
rno-mir-215 MI0003482 37714 None None High
xtr-mir-192 MI0004855 - chr4 38493641 38493727 + -
xtr-mir-215 MI0004868 - chr5 6916154 6916250 + -
bta-mir-215 MI0005016 20323 chr16 24404933 24405011 - High
bta-mir-192 MI0005035 91717 chr29 44018495 44018600 + High
oan-mir-215 MI0006783 503 Contig27098 4335 4452 + High
oan-mir-192 MI0006794 10897 Contig35411 1 91 - High
mml-mir-192 MI0007654 8321 chr14 9567205 9567314 + High
cfa-mir-192 MI0008031 - chr18 52281129 52281193 + -
ptr-mir-192 MI0008565 - chr11 64925467 64925575 - -
cfa-mir-215 MI0010343 - chr38 14895108 14895186 - -
ssc-mir-215 MI0010687 0 chr10 11786567 11786662 - -
mdo-mir-215 MI0012508 25 chr2 130471225 130471327 - -
eca-mir-192 MI0012792 92 chr12 25044238 25044298 - -
eca-mir-215 MI0012938 5 chr30 10337621 10337730 - -
ssc-mir-192 MI0013127 23 chr2 6416980 6417059 + -
tgu-mir-215 MI0013804 - chr3 9653905 9653975 + -
ppy-mir-192 MI0014854 - chr11 11059354 11059463 + -
pma-mir-192 MI0017096 - GL476486.1 89043 89127 - -
aca-mir-215 MI0018818 - chr1 243290652 243290747 - -
ola-mir-192 MI0019500 - 14 20215822 20215919 + -
cgr-mir-192 MI0020438 806 JH001367.1 289739 289818 - Low
cgr-mir-215 MI0020461 2970 JH000002.1 3327065 3327141 + -
ggo-mir-192 MI0020666 - chr11 64077403 64077514 - -
ccr-mir-192 MI0023354 - None None -
ipu-mir-192 MI0024541 - None None -
ssa-mir-192a-1 MI0026551 - None None -
ssa-mir-192a-2 MI0026552 - None None -
efu-mir-215 MI0028610 - JH977666.1 4371074 4371155 + -
efu-mir-192 MI0028863 - JH977826.1 1052626 1052710 - -
chi-mir-192 MI0030665 - chr29 44792471 44792577 - -
chi-mir-215 MI0030690 - chr16 23073850 23073956 - -
tch-mir-192 MI0031287 - KB320702.1 1746694 1746759 - -
oha-mir-215 MI0031416 - AZIM01001511.1 634812 634900 + -



Comments or questions? Email mirbase@manchester.ac.uk