Stem-loop mml-mir-192

Accession

MI0007654

Description

Macaca mulatta mml-mir-192 precursor miRNA mir-192

Gene
family

RF00130; mir-192

Literature search

1 open access papers mention mml-mir-192
(1 sentences)

Sequence

1187610 reads, 8321 reads per million, 9 experiments

gcugagaccgagugcacagggcuCUGACCUAUGAAUUGACAGCCagugcucucgucuccccucuggcUGCCAAUUCCAUAGGUCACAGguauguucgccucaaugccagc
((((.(...(((.(((((.(.((.((((((((((((((.(((((((................))))))).))))).))))))))).)).).)))..)))))....)))))

Structure

    a -acc   u  --   g g  C         -     A       ugcucuc 
gcug g    gag gc  aca g cu UGACCUAUG AAUUG CAGCCag       g
|||| |    ||| ||  ||| | || ||||||||| ||||| |||||||        
cgac c    cuc cg  ugu u GA ACUGGAUAC UUAAC GUcgguc       u
    - guaa   -  cu   a g  C         C     C       uccccuc 

Annotation confidence High

Genome context

chr14: 9567205-9567314 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mml-mir-192

Mature mml-miR-192-5p

• Accession: MIMAT0006224
• Description: Macaca mulatta mml-miR-192-5p mature miRNA
• Sequence: 24 - CUGACCUAUGAAUUGACAGCC - 44
• Evidence: experimental ; Illumina [2]

Mature mml-miR-192-3p

• Accession: MIMAT0026835
• Description: Macaca mulatta mml-miR-192-3p mature miRNA
• Sequence: 68 - UGCCAAUUCCAUAGGUCACAG - 88
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18186931
   Identification of novel homologous microRNA genes in the rhesus macaque genome
   Yue J, Sheng Y, Orwig KE
   BMC Genomics (2008) 9:8


2. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45