Stem-loop ssa-mir-192a-1

Accession

MI0026551

Description

Salmo salar ssa-mir-192a-1 precursor miRNA

Literature search

1 open access papers mention ssa-mir-192a-1
(1 sentences)

Sequence

AUGACCUAUGAAUUGACAGCCaguguuuugcaacacgacugCCUGUCAGUUAUGUAGGCCACU
.((.(((((.(((((((((.((((((........)).)))).)))))))))..))))).))..

Structure

-A  A     -G         C    -  uuu 
  UG CCUAU  AAUUGACAG Cagu gu   g
  || |||||  ||||||||| |||| ||    
  AC GGAUG  UUGACUGUC guca ca   c
UC  C     UA         C    g  caa 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-192a-5p

• Accession: MIMAT0032440
• Description: Salmo salar ssa-miR-192a-5p mature miRNA
• Sequence: 1 - AUGACCUAUGAAUUGACAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-192a-3p

• Accession: MIMAT0032441
• Description: Salmo salar ssa-miR-192a-3p mature miRNA
• Sequence: 42 - CCUGUCAGUUAUGUAGGCCACU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482