miRBase entry: mne-mir-215

Stem-loop mne-mir-215


Accession
MI0003033
Description
Macaca nemestrina mne-mir-215 precursor miRNA


Sequence


aucauuaagaaaugguauacaggaaaAUGACCUAUGAAUUGACAGACacuauagcugaguuugucugucauuucuuuaggccaauauucuguaugacugugcuacuucaa
.......((..(((((((((((((...((.((((.(((.(((((((((..((......)).))))))))).)))..)))).))...)))))))).))))).)).......

Structure
aucauua  aa     -        aaA  A    -U   U         cu  ag 
       ag  auggu auacagga   UG CCUA  GAA UGACAGACa  au  c
       ||  ||||| ||||||||   || ||||  ||| |||||||||  ||   
       uc  uguca uaugucuu   ac ggau  cuu acugucugu  ug  u
aacuuca  -g     g        aua  c    uu   u         -u  ag 


Annotation confidence Low
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Comments
Berezikov et al. used primers designed from human miRNA gene flanking sequence to amplify miRNA precursor regions in primates [1]. The expression of the mature miRNA was not validated.

Genome context
Unknown

Database links

Mature mne-miR-215

Accession MIMAT0002736
Description Macaca nemestrina mne-miR-215 mature miRNA
Sequence 27 - AUGACCUAUGAAUUGACAGAC - 47
Evidence not_experimental

References

  1. PubMed ID: 15652478
    Phylogenetic shadowing and computational identification of human microRNA genes
    "Berezikov E, Guryev V, van de Belt J, Wienholds E, Plasterk RH, Cuppen E"
    "Cell (2005) 120:21-24