Stem-loop ssa-mir-192a-2

Accession

MI0026552

Description

Salmo salar ssa-mir-192a-2 precursor miRNA

Literature search

1 open access papers mention ssa-mir-192a-2
(1 sentences)

Sequence

AUGACCUAUGAAUUGACAGCCaguguuugcaacacaacugCCUGUCAGUUCUGUAGGCCACU
.((.(((((((((((((((.((((............)))).)))))))))).))))).))..

Structure

-A  A     -          C    guuug 
  UG CCUAU GAAUUGACAG Cagu     c
  || ||||| |||||||||| ||||      
  AC GGAUG CUUGACUGUC guca     a
UC  C     U          C    acaca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssa-miR-192a-5p

• Accession: MIMAT0032440
• Description: Salmo salar ssa-miR-192a-5p mature miRNA
• Sequence: 1 - AUGACCUAUGAAUUGACAGCC - 21
• Evidence: experimental ; Illumina [1]

Mature ssa-miR-192a-2-3p

• Accession: MIMAT0032442
• Description: Salmo salar ssa-miR-192a-2-3p mature miRNA
• Sequence: 41 - CCUGUCAGUUCUGUAGGCCACU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23865519
   Discovery and characterization of miRNA genes in Atlantic salmon (Salmo salar) by use of a deep sequencing approach
   Andreassen R, Worren MM, Høyheim B
   BMC Genomics (2013) 14:482