miRBase entry: oha-mir-215

Stem-loop oha-mir-215

Accession

MI0031416

Description

Ophiophagus hannah oha-mir-215 precursor miRNA

Sequence

aggguaAUGACCUAUGAUUUGACAGACUgugcuaucuaagucugcCUGUCAUUUCUGUAGGCCAAUAcucugcauguucacuacucuac
((((((.((.(((((((..((((((.(.(.(((.....)))).).))))))..)).))))).)).))))))..................

Structure

------------------      A  A     -  UU      A U u   a 
                  agggua UG CCUAU GA  UGACAG C g gcu u
                  |||||| || ||||| ||  |||||| | | ||| c
                  ucucAU AC GGAUG CU  ACUGUC g c uga u
caucucaucacuuguacg      A  C     U  UU      c u -   a

Annotation confidence Not enough data

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Genome context

AZIM01001511.1: 634812-634900 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-215

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-215-5p

Accession	MIMAT0036831
Description	Ophiophagus hannah oha-miR-215-5p mature miRNA
Sequence	7 - AUGACCUAUGAUUUGACAGACU - 28
Evidence	not_experimental

Mature oha-miR-215-3p

Accession	MIMAT0036832
Description	Ophiophagus hannah oha-miR-215-3p mature miRNA
Sequence	46 - CUGUCAUUUCUGUAGGCCAAUA - 67
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656