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The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system |
|
|---|---|
| PubMed ID | 24297900 |
| Authors | "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl" |
| Journal | "Proc Natl Acad Sci U S A |
| Volume | 110 |
| Pages | 20651-20656 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| oha-let-7a-1 | MI0031299 | None | AZIM01001439.1 | 259612 | 259700 | + | - |
| oha-let-7a-2 | MI0031300 | None | AZIM01004035.1 | 108548 | 108634 | + | - |
| oha-let-7f-1 | MI0031301 | None | AZIM01000045.1 | 598820 | 598907 | + | - |
| oha-let-7c-1 | MI0031302 | None | AZIM01002460.1 | 20608 | 20684 | - | - |
| oha-let-7c-2 | MI0031303 | None | AZIM01003436.1 | 61152 | 61230 | - | - |
| oha-let-7c-3 | MI0031304 | None | AZIM01000064.1 | 971593 | 971671 | + | - |
| oha-let-7b | MI0031305 | None | AZIM01004035.1 | 110037 | 110128 | + | - |
| oha-let-7d | MI0031306 | None | AZIM01001439.1 | 260630 | 260725 | + | - |
| oha-let-7f-2 | MI0031307 | None | AZIM01001439.1 | 260084 | 260179 | + | - |
| oha-let-7a-3 | MI0031308 | None | AZIM01002240.1 | 87699 | 87785 | + | - |
| oha-let-7g | MI0031309 | None | AZIM01000063.1 | 281139 | 281235 | - | - |
| oha-let-7i | MI0031310 | None | AZIM01007298.1 | 25671 | 25764 | + | - |
| oha-let-7e | MI0031311 | None | AZIM01002240.1 | 87470 | 87561 | + | - |
| oha-mir-1a | MI0031312 | None | AZIM01001242.1 | 204419 | 204511 | - | - |
| oha-mir-100 | MI0031313 | None | AZIM01002460.1 | 28414 | 28497 | - | - |
| oha-mir-101a | MI0031314 | None | AZIM01000560.1 | 292653 | 292734 | + | - |
| oha-mir-101b | MI0031315 | None | AZIM01000420.1 | 86263 | 86359 | - | - |
| oha-mir-107 | MI0031316 | None | AZIM01001029.1 | 157003 | 157081 | + | - |
| oha-mir-103a | MI0031317 | None | AZIM01003360.1 | 7261 | 7329 | + | - |
| oha-mir-103b | MI0031318 | None | AZIM01062068.1 | 339 | 422 | - | - |
| oha-mir-10a | MI0031319 | None | AZIM01000025.1 | 195141 | 195252 | - | - |
| oha-mir-10b | MI0031320 | None | AZIM01001075.1 | 119644 | 119741 | + | - |
| oha-mir-10c | MI0031321 | None | AZIM01000055.1 | 585895 | 585971 | + | - |
| oha-mir-122 | MI0031322 | None | AZIM01005362.1 | 15232 | 15306 | + | - |
| oha-mir-124-1 | MI0031323 | None | AZIM01001477.1 | 191544 | 191652 | + | - |
| oha-mir-124-2 | MI0031324 | None | AZIM01011395.1 | 15888 | 15964 | - | - |
| oha-mir-124-4 | MI0031325 | None | AZIM01002341.1 | 221536 | 221612 | - | - |
| oha-mir-124-3 | MI0031326 | None | AZIM01005634.1 | 85469 | 85543 | + | - |
| oha-mir-125a | MI0031327 | None | AZIM01003436.1 | 52689 | 52776 | - | - |
| oha-mir-125b | MI0031328 | None | AZIM01005224.1 | 18951 | 19046 | + | - |
| oha-mir-126 | MI0031329 | None | AZIM01002662.1 | 65348 | 65424 | - | - |
| oha-mir-128 | MI0031330 | None | AZIM01001004.1 | 127570 | 127648 | - | - |
| oha-mir-129a | MI0031331 | None | AZIM01005626.1 | 30859 | 30937 | - | - |
| oha-mir-129b-2 | MI0031332 | None | AZIM01001089.1 | 47048 | 47147 | - | - |
| oha-mir-129b-1 | MI0031333 | None | AZIM01003634.1 | 10306 | 10420 | + | - |
| oha-mir-1306 | MI0031334 | None | AZIM01003844.1 | 64424 | 64515 | - | - |
| oha-mir-130a | MI0031335 | None | AZIM01005047.1 | 55733 | 55810 | - | - |
| oha-mir-130b | MI0031336 | None | AZIM01007303.1 | 15846 | 15928 | + | - |
| oha-mir-130c | MI0031337 | None | AZIM01000945.1 | 91158 | 91253 | - | - |
| oha-mir-130d | MI0031338 | None | AZIM01005047.1 | 32145 | 32238 | - | - |
| oha-mir-132 | MI0031339 | None | AZIM01003666.1 | 36656 | 36745 | - | - |
| oha-mir-1329 | MI0031340 | None | AZIM01001276.1 | 130192 | 130286 | - | - |
| oha-mir-133a-1 | MI0031341 | None | AZIM01001242.1 | 200581 | 200657 | - | - |
| oha-mir-133a-2 | MI0031342 | None | AZIM01006716.1 | 100339 | 100415 | - | - |
| oha-mir-133b | MI0031343 | None | AZIM01001691.1 | 30573 | 30658 | - | - |
| oha-mir-133a-3 | MI0031344 | None | AZIM01000323.1 | 267287 | 267367 | + | - |
| oha-mir-135-1 | MI0031345 | None | AZIM01000063.1 | 321331 | 321411 | - | - |
| oha-mir-135-2 | MI0031346 | None | AZIM01001783.1 | 364665 | 364773 | + | - |
| oha-mir-135-3 | MI0031347 | None | AZIM01001051.1 | 235831 | 235918 | - | - |
| oha-mir-137 | MI0031348 | None | AZIM01000771.1 | 172611 | 172692 | + | - |
| oha-mir-138-1 | MI0031349 | None | AZIM01005485.1 | 8165 | 8235 | - | - |
| oha-mir-138-2 | MI0031350 | None | AZIM01001672.1 | 63853 | 63930 | - | - |
| oha-mir-1388 | MI0031351 | None | AZIM01011697.1 | 80 | 175 | - | - |
| oha-mir-139 | MI0031352 | None | AZIM01006393.1 | 6852 | 6928 | + | - |
| oha-mir-1397 | MI0031353 | None | AZIM01001407.1 | 8562 | 8679 | + | - |
| oha-mir-140 | MI0031354 | None | AZIM01001080.1 | 153801 | 153879 | + | - |
| oha-mir-142 | MI0031355 | None | AZIM01001308.1 | 316277 | 316374 | - | - |
| oha-mir-143 | MI0031356 | None | AZIM01000254.1 | 119771 | 119838 | - | - |
| oha-mir-144 | MI0031357 | None | AZIM01003573.1 | 17943 | 18012 | - | - |
| oha-mir-145 | MI0031358 | None | AZIM01000254.1 | 119187 | 119258 | - | - |
| oha-mir-146b | MI0031359 | None | AZIM01000124.1 | 99472 | 99578 | - | - |
| oha-mir-147-1 | MI0031360 | None | AZIM01002333.1 | 95970 | 96048 | + | - |
| oha-mir-148a | MI0031361 | None | AZIM01002564.1 | 331423 | 331493 | + | - |
| oha-mir-148b | MI0031362 | None | AZIM01000468.1 | 154297 | 154391 | - | - |
| oha-mir-150 | MI0031363 | None | AZIM01000455.1 | 296564 | 296647 | + | - |
| oha-mir-153-1 | MI0031364 | None | AZIM01000183.1 | 172560 | 172635 | + | - |
| oha-mir-153-2 | MI0031365 | None | AZIM01000489.1 | 385861 | 385935 | - | - |
| oha-mir-15a | MI0031366 | None | AZIM01000178.1 | 249265 | 249363 | - | - |
| oha-mir-15b | MI0031367 | None | AZIM01002644.1 | 127834 | 127914 | + | - |
| oha-mir-16a | MI0031368 | None | AZIM01002914.1 | 113190 | 113278 | + | - |
| oha-mir-16b | MI0031369 | None | AZIM01000178.1 | 249110 | 249192 | - | - |
| oha-mir-1641 | MI0031370 | None | AZIM01000439.1 | 76290 | 76389 | - | - |
| oha-mir-1677b | MI0031371 | None | AZIM01001067.1 | 888654 | 888742 | - | - |
| oha-mir-17 | MI0031372 | None | AZIM01002132.1 | 158388 | 158479 | - | - |
| oha-mir-1788 | MI0031373 | None | AZIM01000184.1 | 463348 | 463445 | + | - |
| oha-mir-1805 | MI0031374 | None | AZIM01003377.1 | 104375 | 104467 | - | - |
| oha-mir-181a-1 | MI0031375 | None | AZIM01017604.1 | 70 | 160 | + | - |
| oha-mir-181a-2 | MI0031376 | None | AZIM01000021.1 | 758346 | 758431 | + | - |
| oha-mir-181c | MI0031377 | None | AZIM01000021.1 | 758696 | 758788 | + | - |
| oha-mir-181b | MI0031378 | None | AZIM01049547.1 | 1 | 93 | - | - |
| oha-mir-182 | MI0031379 | None | AZIM01011671.1 | 467 | 540 | - | - |
| oha-mir-183 | MI0031380 | None | AZIM01023994.1 | 622 | 697 | + | - |
| oha-mir-18a | MI0031381 | None | AZIM01002132.1 | 158255 | 158334 | - | - |
| oha-mir-18b | MI0031382 | None | AZIM01002644.1 | 177020 | 177099 | + | - |
| oha-mir-190a | MI0031383 | None | AZIM01000142.1 | 551275 | 551346 | - | - |
| oha-mir-1905 | MI0031384 | None | AZIM01001727.1 | 42185 | 42275 | + | - |
| oha-mir-190b | MI0031385 | None | AZIM01047643.1 | 535 | 630 | + | - |
| oha-mir-191 | MI0031386 | None | AZIM01001838.1 | 347131 | 347216 | - | - |
| oha-mir-193 | MI0031387 | None | AZIM01000911.1 | 122155 | 122228 | - | - |
| oha-mir-194-1 | MI0031388 | None | AZIM01001511.1 | 634495 | 634574 | + | - |
| oha-mir-196a | MI0031389 | None | AZIM01000025.1 | 268340 | 268443 | - | - |
| oha-mir-196b | MI0031390 | None | AZIM01001075.1 | 39279 | 39388 | + | - |
| oha-mir-196c | MI0031391 | None | AZIM01000260.1 | 324589 | 324683 | + | - |
| oha-mir-199a | MI0031392 | None | AZIM01003287.1 | 39727 | 39799 | - | - |
| oha-mir-199b | MI0031393 | None | AZIM01003798.1 | 142031 | 142121 | - | - |
| oha-mir-199c | MI0031394 | None | AZIM01005115.1 | 134705 | 134801 | - | - |
| oha-mir-19a | MI0031395 | None | AZIM01002132.1 | 158114 | 158203 | - | - |
| oha-mir-19b | MI0031396 | None | AZIM01002132.1 | 157823 | 157918 | - | - |
| oha-mir-1b | MI0031397 | None | AZIM01003801.1 | 26787 | 26863 | - | - |
| oha-mir-1c | MI0031398 | None | AZIM01001242.1 | 204419 | 204510 | + | - |
| oha-mir-1d | MI0031399 | None | AZIM01000323.1 | 267115 | 267185 | + | - |
| oha-mir-20b | MI0031400 | None | AZIM01002644.1 | 179551 | 179635 | + | - |
| oha-mir-200a | MI0031401 | None | AZIM01000256.1 | 133883 | 133980 | + | - |
| oha-mir-202 | MI0031402 | None | AZIM01006811.1 | 28249 | 28331 | + | - |
| oha-mir-203 | MI0031403 | None | AZIM01001640.1 | 210581 | 210660 | - | - |
| oha-mir-204-1 | MI0031404 | None | AZIM01000745.1 | 257781 | 257857 | - | - |
| oha-mir-204-2 | MI0031405 | None | AZIM01000190.1 | 1085405 | 1085498 | + | - |
| oha-mir-205a | MI0031406 | None | AZIM01005747.1 | 92682 | 92773 | + | - |
| oha-mir-205b | MI0031407 | None | AZIM01006323.1 | 17692 | 17765 | + | - |
| oha-mir-206 | MI0031408 | None | AZIM01001691.1 | 32078 | 32156 | - | - |
| oha-mir-208 | MI0031409 | None | AZIM01001657.1 | 136379 | 136474 | + | - |
| oha-mir-20a | MI0031410 | None | AZIM01002132.1 | 157971 | 158048 | - | - |
| oha-mir-21 | MI0031411 | None | AZIM01005944.1 | 49865 | 49945 | + | - |
| oha-mir-210 | MI0031412 | None | AZIM01000089.1 | 101059 | 101136 | + | - |
| oha-mir-204-3 | MI0031413 | None | AZIM01000467.1 | 267631 | 267701 | + | - |
| oha-mir-212 | MI0031414 | None | AZIM01003666.1 | 43009 | 43114 | - | - |
| oha-mir-3120 | MI0031415 | None | AZIM01005115.1 | 129827 | 129916 | + | - |
| oha-mir-215 | MI0031416 | None | AZIM01001511.1 | 634812 | 634900 | + | - |
| oha-mir-216 | MI0031417 | None | AZIM01000377.1 | 298835 | 298941 | - | - |
| oha-mir-217 | MI0031418 | None | AZIM01000377.1 | 292504 | 292604 | - | - |
| oha-mir-218-1 | MI0031419 | None | AZIM01000557.1 | 744088 | 744195 | - | - |
| oha-mir-218-2 | MI0031420 | None | AZIM01000153.1 | 403906 | 404006 | + | - |
| oha-mir-2188 | MI0031421 | None | AZIM01004815.1 | 42038 | 42134 | + | - |
| oha-mir-219-1 | MI0031422 | None | AZIM01007581.1 | 26349 | 26428 | - | - |
| oha-mir-219-2 | MI0031423 | None | AZIM01007730.1 | 8609 | 8687 | - | - |
| oha-mir-22b | MI0031424 | None | AZIM01069197.1 | 502 | 584 | + | - |
| oha-mir-22a | MI0031425 | None | AZIM01069197.1 | 502 | 584 | - | - |
| oha-mir-221 | MI0031426 | None | AZIM01002126.1 | 54879 | 54982 | - | - |
| oha-mir-222a | MI0031427 | None | AZIM01002126.1 | 55630 | 55726 | - | - |
| oha-mir-222b | MI0031428 | None | AZIM01003920.1 | 81717 | 81787 | + | - |
| oha-mir-223 | MI0031429 | None | AZIM01002752.1 | 34486 | 34564 | - | - |
| oha-mir-23a | MI0031430 | None | AZIM01000021.1 | 587507 | 587593 | - | - |
| oha-mir-23b | MI0031431 | None | AZIM01002605.1 | 297373 | 297455 | - | - |
| oha-mir-24-1 | MI0031432 | None | AZIM01002605.1 | 296607 | 296683 | - | - |
| oha-mir-24-2 | MI0031433 | None | AZIM01000021.1 | 587002 | 587078 | - | - |
| oha-mir-26-1 | MI0031434 | None | AZIM01000386.1 | 244712 | 244803 | + | - |
| oha-mir-26-2 | MI0031435 | None | AZIM01002704.1 | 89219 | 89298 | + | - |
| oha-mir-26-3 | MI0031436 | None | AZIM01000576.1 | 36290 | 36374 | - | - |
| oha-mir-27a | MI0031437 | None | AZIM01000021.1 | 587262 | 587332 | - | - |
| oha-mir-27b | MI0031438 | None | AZIM01002605.1 | 297162 | 297243 | - | - |
| oha-mir-2970 | MI0031439 | None | AZIM01001838.1 | 342227 | 342309 | - | - |
| oha-mir-2985a-2 | MI0031440 | None | AZIM01000231.1 | 209359 | 209442 | + | - |
| oha-mir-2985a-1 | MI0031441 | None | AZIM01002937.1 | 52792 | 52876 | - | - |
| oha-mir-2985b | MI0031442 | None | AZIM01000918.1 | 190198 | 190289 | - | - |
| oha-mir-29a-1 | MI0031443 | None | AZIM01006006.1 | 37751 | 37846 | + | - |
| oha-mir-29b-1 | MI0031444 | None | AZIM01006006.1 | 36965 | 37054 | + | - |
| oha-mir-29b-2 | MI0031445 | None | AZIM01003025.1 | 10816 | 10903 | - | - |
| oha-mir-29a-2 | MI0031446 | None | AZIM01004013.1 | 152357 | 152455 | + | - |
| oha-mir-301b | MI0031447 | None | AZIM01005047.1 | 53445 | 53543 | - | - |
| oha-mir-301a | MI0031448 | None | AZIM01007303.1 | 17563 | 17656 | + | - |
| oha-mir-30e | MI0031449 | None | AZIM01001612.1 | 354780 | 354855 | + | - |
| oha-mir-30a | MI0031450 | None | AZIM01003324.1 | 111742 | 111822 | - | - |
| oha-mir-30b | MI0031451 | None | AZIM01004649.1 | 75289 | 75376 | - | - |
| oha-mir-30c-2 | MI0031452 | None | AZIM01001612.1 | 358960 | 359056 | + | - |
| oha-mir-30c-1 | MI0031453 | None | AZIM01003324.1 | 96890 | 96968 | - | - |
| oha-mir-30d | MI0031454 | None | AZIM01004649.1 | 79018 | 79101 | - | - |
| oha-mir-31 | MI0031455 | None | AZIM01002885.1 | 21934 | 22012 | - | - |
| oha-mir-32-1 | MI0031456 | None | AZIM01004762.1 | 14849 | 14927 | + | - |
| oha-mir-33-2 | MI0031457 | None | AZIM01000256.1 | 222162 | 222251 | - | - |
| oha-mir-338 | MI0031458 | None | AZIM01000013.1 | 479336 | 479409 | - | - |
| oha-mir-33a | MI0031459 | None | AZIM01002918.1 | 107353 | 107424 | - | - |
| oha-mir-34a | MI0031460 | None | AZIM01008802.1 | 1748 | 1852 | - | - |
| oha-mir-34c | MI0031461 | None | AZIM01001015.1 | 295372 | 295452 | + | - |
| oha-mir-3618 | MI0031462 | None | AZIM01003844.1 | 64757 | 64852 | - | - |
| oha-mir-363 | MI0031463 | None | AZIM01002644.1 | 179985 | 180068 | + | - |
| oha-mir-365a-1 | MI0031464 | None | AZIM01000267.1 | 83635 | 83726 | - | - |
| oha-mir-365a-2 | MI0031465 | None | AZIM01000911.1 | 71016 | 71112 | - | - |
| oha-mir-375 | MI0031466 | None | AZIM01000184.1 | 433435 | 433516 | + | - |
| oha-mir-383 | MI0031467 | None | AZIM01001937.1 | 343504 | 343585 | + | - |
| oha-mir-425 | MI0031468 | None | AZIM01001838.1 | 344550 | 344646 | - | - |
| oha-mir-429 | MI0031469 | None | AZIM01000256.1 | 137861 | 137949 | + | - |
| oha-mir-449a | MI0031470 | None | AZIM01000175.1 | 575592 | 575687 | - | - |
| oha-mir-449c | MI0031471 | None | AZIM01000175.1 | 574995 | 575077 | - | - |
| oha-mir-451 | MI0031472 | None | AZIM01003573.1 | 16604 | 16662 | - | - |
| oha-mir-455 | MI0031473 | None | AZIM01007366.1 | 24031 | 24124 | + | - |
| oha-mir-456 | MI0031474 | None | AZIM01004097.1 | 14818 | 14895 | - | - |
| oha-mir-458 | MI0031475 | None | AZIM01004436.1 | 40502 | 40588 | + | - |
| oha-mir-490 | MI0031476 | None | AZIM01000546.1 | 118055 | 118172 | + | - |
| oha-mir-499 | MI0031477 | None | AZIM01000400.1 | 197573 | 197668 | + | - |
| oha-mir-5391 | MI0031478 | None | AZIM01001411.1 | 95983 | 96059 | - | - |
| oha-mir-5470 | MI0031479 | None | AZIM01000302.1 | 289314 | 289405 | - | - |
| oha-mir-551b | MI0031480 | None | AZIM01003424.1 | 197293 | 197384 | + | - |
| oha-mir-599 | MI0031481 | None | AZIM01000686.1 | 88304 | 88390 | - | - |
| oha-mir-7-1 | MI0031482 | None | AZIM01000756.1 | 171091 | 171209 | - | - |
| oha-mir-7-2 | MI0031483 | None | AZIM01000779.1 | 243565 | 243654 | - | - |
| oha-mir-7-3 | MI0031484 | None | AZIM01005979.1 | 8461 | 8552 | + | - |
| oha-mir-737 | MI0031485 | None | AZIM01005033.1 | 104201 | 104298 | + | - |
| oha-mir-875 | MI0031486 | None | AZIM01000686.1 | 88441 | 88530 | - | - |
| oha-mir-9-1 | MI0031487 | None | AZIM01001989.1 | 73489 | 73583 | + | - |
| oha-mir-9-2 | MI0031488 | None | AZIM01000360.1 | 98944 | 99023 | - | - |
| oha-mir-9-3 | MI0031489 | None | AZIM01005650.1 | 31860 | 31944 | - | - |
| oha-mir-9-4 | MI0031490 | None | AZIM01000861.1 | 231982 | 232060 | + | - |
| oha-mir-92a-1 | MI0031491 | None | AZIM01002132.1 | 157713 | 157800 | - | - |
| oha-mir-92a-2 | MI0031492 | None | AZIM01002644.1 | 179818 | 179909 | + | - |
| oha-mir-96 | MI0031493 | None | AZIM01007420.1 | 5323 | 5414 | - | - |
| oha-mir-98 | MI0031494 | None | AZIM01000045.1 | 599246 | 599349 | + | - |
| oha-mir-99a | MI0031495 | None | AZIM01000064.1 | 967763 | 967852 | + | - |
| oha-mir-99b | MI0031496 | None | AZIM01003436.1 | 63475 | 63553 | - | - |