miRBase entry: oha-mir-130a

Stem-loop oha-mir-130a

Accession

MI0031335

Description

Ophiophagus hannah oha-mir-130a precursor miRNA

Sequence

cugUGCCCUUUUUCUGUUGUACUacugggagcucucauuagCAGUGCAAUAUUAAAAGGGCAUuggcuggcagagguu
(.((((((((((..(((((((((.((((((....)).)))).)))))))))..)))))))))).)(((......))).

Structure

------------- u          UC         a    -  g 
             c gUGCCCUUUU  UGUUGUACU cugg ga c
             | ||||||||||  ||||||||| |||| ||  
             g UACGGGAAAA  AUAACGUGA gauu cu u
uuggagacggucg u          UU         C    a  c

Annotation confidence Not enough data

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Genome context

AZIM01005047.1: 55733-55810 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-130a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-130a-5p

Accession	MIMAT0036687
Description	Ophiophagus hannah oha-miR-130a-5p mature miRNA
Sequence	4 - UGCCCUUUUUCUGUUGUACU - 23
Evidence	not_experimental

Mature oha-miR-130a-3p

Accession	MIMAT0036688
Description	Ophiophagus hannah oha-miR-130a-3p mature miRNA
Sequence	42 - CAGUGCAAUAUUAAAAGGGCAU - 63
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656