miRBase entry: oha-mir-212

Stem-loop oha-mir-212

Accession

MI0031414

Description

Ophiophagus hannah oha-mir-212 precursor miRNA

Sequence

cgcccccggccagcucgucaggACCUUGGCUCUAGACUGCUUACUGcuacaggugugcgaggcacagUAACAGUCUACAGUCAUGGCcacugacgucuggcagcgg
.....((((((((..(((((((.((.(((((.(((((((.(((((.......((((.....)))))))))))))))).))))).)).).)))))).)))))..)))

Structure

cgccc   --     cu      - A  U     C       C     Gcuacag    g 
     ccg  gccag  cgucag g CC UGGCU UAGACUG UUACU       gugu c
     |||  |||||  |||||| | || ||||| ||||||| |||||       |||| g
     ggc  cgguc  gcaguc c GG ACUGA AUCUGAC AAUga       cacg a
-----   ga     -u      a C  U     C       -     -------    g

Annotation confidence Not enough data

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Genome context

AZIM01003666.1: 43009-43114 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-212

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-212-5p

Accession	MIMAT0036828
Description	Ophiophagus hannah oha-miR-212-5p mature miRNA
Sequence	23 - ACCUUGGCUCUAGACUGCUUACUG - 46
Evidence	not_experimental

Mature oha-miR-212-3p

Accession	MIMAT0036829
Description	Ophiophagus hannah oha-miR-212-3p mature miRNA
Sequence	68 - UAACAGUCUACAGUCAUGGC - 87
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656