miRBase entry: oha-mir-30b

Stem-loop oha-mir-30b

Accession

MI0031451

Description

Ophiophagus hannah oha-mir-30b precursor miRNA

Sequence

uguuaguucgUGUAAACAUCCUACACUCAGCUuuuaucccaugaaauggCUGGGGGAUGGAAGUUCACUUCaacugauuuggaaagac
.(((((((...((.(((.(((....((((((((((((...)))))..)))))))....))).))).))...)))))))..........

Structure

---------u       cgU  A   A   UACA       --     c 
          guuaguu   GU AAC UCC    CUCAGCU  uuuau  
          |||||||   || ||| |||    |||||||  ||||| c
          uagucaa   CA UUG AGG    GGGUCgg  aagua  
cagaaagguu       CUU  C   A   UAGG       ua     c

Annotation confidence Not enough data

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Genome context

AZIM01004649.1: 75289-75376 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-30b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-30b-5p

Accession	MIMAT0036890
Description	Ophiophagus hannah oha-miR-30b-5p mature miRNA
Sequence	11 - UGUAAACAUCCUACACUCAGCU - 32
Evidence	not_experimental

Mature oha-miR-30b-3p

Accession	MIMAT0036891
Description	Ophiophagus hannah oha-miR-30b-3p mature miRNA
Sequence	50 - CUGGGGGAUGGAAGUUCACUUC - 71
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656