Stem-loop oha-mir-18a

Accession

MI0031381

Description

Ophiophagus hannah oha-mir-18a precursor miRNA

Sequence

uuuuuguucUAAGGUGCAUCUAGUGCAGAUAGugaaauagauuagcaucuACUGCCCUAAGUGCUCCUUCUGgcauaaga
....((((..((((.((((.(((.((((.(((((..(.....)..)).))))))).))).)))).))))..)))).....

Structure

-uuuu    cU    U    C   U    A   -  aa u 
     uguu  AAGG GCAU UAG GCAG UAG ug  a a
     ||||  |||| |||| ||| |||| ||| ||  | g
     acgG  UUCC CGUG AUC CGUC Auc ac  u a
agaau    UC    U    A   C    -   u  ga u 

Annotation confidence Not enough data

Genome context

AZIM01002132.1: 158255-158334 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from oha-mir-18a

Mature oha-miR-18a-5p

• Accession: MIMAT0036768
• Description: Ophiophagus hannah oha-miR-18a-5p mature miRNA
• Sequence: 10 - UAAGGUGCAUCUAGUGCAGAUAG - 32
• Evidence: not_experimental

Mature oha-miR-18a-3p

• Accession: MIMAT0036769
• Description: Ophiophagus hannah oha-miR-18a-3p mature miRNA
• Sequence: 51 - ACUGCCCUAAGUGCUCCUUCUG - 72
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656