miRBase entry: oha-mir-449a

Stem-loop oha-mir-449a

Accession

MI0031470

Description

Ophiophagus hannah oha-mir-449a precursor miRNA

Sequence

uguguguguaguggaaUGGCAGUGUACUGUUAGCUGGAuggauauccagauggcACCAGCUGACAUUCAGCUGCCAgccuacggcacauauuuugg
.((((((((.((((..(((((((....((((((((((.((.............))))))))))))....)))))))..)))).)))))))).....

Structure

----u        a    aa       GUAC          A  gauau 
     gugugugu gugg  UGGCAGU    UGUUAGCUGG ug     c
     |||||||| ||||  |||||||    |||||||||| ||     c
     uauacacg cauc  ACCGUCG    ACAGUCGACC Ac     a
gguuu        g    cg       ACUU          -  gguag

Annotation confidence Not enough data

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Genome context

AZIM01000175.1: 575592-575687 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-449a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-449a-5p

Accession	MIMAT0036925
Description	Ophiophagus hannah oha-miR-449a-5p mature miRNA
Sequence	17 - UGGCAGUGUACUGUUAGCUGGA - 38
Evidence	not_experimental

Mature oha-miR-449a-3p

Accession	MIMAT0036926
Description	Ophiophagus hannah oha-miR-449a-3p mature miRNA
Sequence	55 - ACCAGCUGACAUUCAGCUGCCA - 76
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656