miRBase entry: oha-mir-429

Stem-loop oha-mir-429

Accession

MI0031469

Description

Ophiophagus hannah oha-mir-429 precursor miRNA

Gene family

MIPF0000019; mir-8

Sequence

cugcuugccggccgaucgcuGUCUUACCAGACAAAUUUAGAucuuaaucuaucgcugucUAAUACUGUCUGGUAAUGCCGUCgauuugc
..........((.((((((.((.((((((((((...((((((..............))))))...)))))))))).)).).))))).))

Structure

cugcuugccg  c     - u  C          AAU      cuuaau 
          gc gaucg c GU UUACCAGACA   UUAGAu      c
          || ||||| | || ||||||||||   ||||||       
          cg uuagC G CG AAUGGUCUGU   AAUcug      u
----------  u     U C  U          CAU      ucgcua

Annotation confidence Not enough data

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Genome context

AZIM01000256.1: 137861-137949 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-429

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-429-5p

Accession	MIMAT0036923
Description	Ophiophagus hannah oha-miR-429-5p mature miRNA
Sequence	21 - GUCUUACCAGACAAAUUUAGA - 41
Evidence	not_experimental

Mature oha-miR-429-3p

Accession	MIMAT0036924
Description	Ophiophagus hannah oha-miR-429-3p mature miRNA
Sequence	60 - UAAUACUGUCUGGUAAUGCCGUC - 82
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656