Stem-loop oha-mir-30c-2

Accession

MI0031452

Description

Ophiophagus hannah oha-mir-30c-2 precursor miRNA

Sequence

ccuagccauguagcagugugUGUAAACAUCCUACACUCUCAGCUgugacuuugugguAGCUGGGAGAAGGUUGUUUACgccuccuggcauggacugg
.((((((((((..(((.(.(((((((((.(((...(((((((((((.((...)).))))))))))).))).)))))))))..)))))))))).))))

Structure

c    -      ag   u -u         U   ACA           g  u 
 cuag ccaugu  cag g  gUGUAAACA CCU   CUCUCAGCUgu ac  
 |||| ||||||  ||| |  ||||||||| |||   ||||||||||| || u
 gguc gguacg  guc c  cgCAUUUGU GGA   GAGGGUCGAug ug  
-    a      --   - uc         U   --A           g  u 

Annotation confidence Not enough data

Genome context

AZIM01001612.1: 358960-359056 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-30c-2

Mature oha-miR-30c-5p

• Accession: MIMAT0036892
• Description: Ophiophagus hannah oha-miR-30c-5p mature miRNA
• Sequence: 21 - UGUAAACAUCCUACACUCUCAGCU - 44
• Evidence: not_experimental

Mature oha-miR-30c-2-3p

• Accession: MIMAT0036893
• Description: Ophiophagus hannah oha-miR-30c-2-3p mature miRNA
• Sequence: 58 - AGCUGGGAGAAGGUUGUUUAC - 78
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656