Stem-loop oha-mir-1306

Accession

MI0031334

Description

Ophiophagus hannah oha-mir-1306 precursor miRNA

Sequence

caacgaacagccucCACCACCUCCCCUGCAAACGUCCagugacgcagagguaaUGGACGUUAGCUCCGGUGGUGAUggacagucagauaccc
....((....((..(((((((......((.((((((((...((......))..)))))))).))...)))))))..))....))........

Structure

----caac  acag  uc       UCCCCU  A        gug  gc 
        ga    cc  CACCACC      GC AACGUCCa   ac  a
        ||    ||  |||||||      || ||||||||   ||   
        cu    gg  GUGGUGG      CG UUGCAGGU   ug  g
cccauaga  gaca  UA       ---CCU  A        -aa  ga 

Annotation confidence Not enough data

Genome context

AZIM01003844.1: 64424-64515 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-1306

Mature oha-miR-1306-5p

• Accession: MIMAT0036685
• Description: Ophiophagus hannah oha-miR-1306-5p mature miRNA
• Sequence: 15 - CACCACCUCCCCUGCAAACGUCC - 37
• Evidence: not_experimental

Mature oha-miR-1306-3p

• Accession: MIMAT0036686
• Description: Ophiophagus hannah oha-miR-1306-3p mature miRNA
• Sequence: 54 - UGGACGUUAGCUCCGGUGGUGAU - 76
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656