Stem-loop oha-mir-130b

Accession

MI0031336

Description

Ophiophagus hannah oha-mir-130b precursor miRNA

Sequence

uguccguccacUGCCCUUUUUAUGUUGUACUAcuagugaacaugcacaaaaagCAGUGCAAUGUUAAAAGGGCAUuggcuggu
...(((.(((.(((((((((.((((((((((.((.(((......)))....)).)))))))))).))))))))).))).))).

Structure

ugu   u   c         U          A  ---a   aa 
   ccg cca UGCCCUUUU AUGUUGUACU cu    gug  c
   ||| ||| ||||||||| |||||||||| ||    |||   
   ggu ggu ACGGGAAAA UGUAACGUGA ga    cac  a
--u   c   U         U          C  aaaa   gu 

Annotation confidence Not enough data

Genome context

AZIM01007303.1: 15846-15928 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-130b

Mature oha-miR-130b-5p

• Accession: MIMAT0036689
• Description: Ophiophagus hannah oha-miR-130b-5p mature miRNA
• Sequence: 12 - UGCCCUUUUUAUGUUGUACUA - 32
• Evidence: not_experimental

Mature oha-miR-130b-3p

• Accession: MIMAT0036690
• Description: Ophiophagus hannah oha-miR-130b-3p mature miRNA
• Sequence: 54 - CAGUGCAAUGUUAAAAGGGCAU - 75
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656