miRBase entry: oha-mir-130b

Stem-loop oha-mir-130b

Accession

MI0031336

Description

Ophiophagus hannah oha-mir-130b precursor miRNA

Sequence

uguccguccacUGCCCUUUUUAUGUUGUACUAcuagugaacaugcacaaaaagCAGUGCAAUGUUAAAAGGGCAUuggcuggu
...(((.(((.(((((((((.((((((((((.((.(((......)))....)).)))))))))).))))))))).))).))).

Structure

ugu   u   c         U          A  ---a   aa 
   ccg cca UGCCCUUUU AUGUUGUACU cu    gug  c
   ||| ||| ||||||||| |||||||||| ||    |||   
   ggu ggu ACGGGAAAA UGUAACGUGA ga    cac  a
--u   c   U         U          C  aaaa   gu

Annotation confidence Not enough data

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Genome context

AZIM01007303.1: 15846-15928 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-130b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-130b-5p

Accession	MIMAT0036689
Description	Ophiophagus hannah oha-miR-130b-5p mature miRNA
Sequence	12 - UGCCCUUUUUAUGUUGUACUA - 32
Evidence	not_experimental

Mature oha-miR-130b-3p

Accession	MIMAT0036690
Description	Ophiophagus hannah oha-miR-130b-3p mature miRNA
Sequence	54 - CAGUGCAAUGUUAAAAGGGCAU - 75
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656