miRBase entry: oha-mir-125a

Stem-loop oha-mir-125a

Accession

MI0031327

Description

Ophiophagus hannah oha-mir-125a precursor miRNA

Sequence

ucccggcaucuucucugUCCCUGAGACCCUUAACCUGUGaggaagcccagaggucACAGGUGAGGGCCUUGGGAACugaguggguugu
.....((((((.(((.((.((((((.((((((.(((((((((....)).....))))))))))))).)))))).)).))).))).)))

Structure

ucccg   -   u   u  C      A      A       -----  a 
     gca ucu cuc gU CCUGAG CCCUUA CCUGUGa     gg a
     ||| ||| ||| || |||||| |||||| |||||||     ||  
     ugu ggg gag CA GGGUUC GGGAGU GGACAcu     cc g
-----   u   u   u  A      C      -       ggaga  c

Annotation confidence Not enough data

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Genome context

AZIM01003436.1: 52689-52776 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-125a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-125a-5p

Accession	MIMAT0036672
Description	Ophiophagus hannah oha-miR-125a-5p mature miRNA
Sequence	18 - UCCCUGAGACCCUUAACCUGUG - 39
Evidence	not_experimental

Mature oha-miR-125a-3p

Accession	MIMAT0036673
Description	Ophiophagus hannah oha-miR-125a-3p mature miRNA
Sequence	56 - ACAGGUGAGGGCCUUGGGAAC - 76
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656