miRBase entry: oha-mir-30d

Stem-loop oha-mir-30d

Accession

MI0031454

Description

Ophiophagus hannah oha-mir-30d precursor miRNA

Sequence

uuguagucuguuguUGUAAACAUCCCCGACUGGAAGCUggaaaacguagCUUUCAGUCCGAUGUUUGCUGCugcuggcuacuca
..((((((.((.((.(((((((((...((((((((((((.......)))))))))))).))))))))).)).)).))))))...

Structure

-uu      u  u  U         CCC            ga 
   guaguc gu gu GUAAACAUC   GACUGGAAGCUg  a
   |||||| || || |||||||||   ||||||||||||  a
   caucgg cg CG CGUUUGUAG   CUGACUUUCgau  a
acu      u  u  U         --C            gc

Annotation confidence Not enough data

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Genome context

AZIM01004649.1: 79018-79101 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-30d

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-30d-5p

Accession	MIMAT0036895
Description	Ophiophagus hannah oha-miR-30d-5p mature miRNA
Sequence	15 - UGUAAACAUCCCCGACUGGAAGCU - 38
Evidence	not_experimental

Mature oha-miR-30d-3p

Accession	MIMAT0036896
Description	Ophiophagus hannah oha-miR-30d-3p mature miRNA
Sequence	50 - CUUUCAGUCCGAUGUUUGCUGC - 71
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656