Stem-loop oha-mir-30d

Accession

MI0031454

Description

Ophiophagus hannah oha-mir-30d precursor miRNA

Sequence

uuguagucuguuguUGUAAACAUCCCCGACUGGAAGCUggaaaacguagCUUUCAGUCCGAUGUUUGCUGCugcuggcuacuca
..((((((.((.((.(((((((((...((((((((((((.......)))))))))))).))))))))).)).)).))))))...

Structure

-uu      u  u  U         CCC            ga 
   guaguc gu gu GUAAACAUC   GACUGGAAGCUg  a
   |||||| || || |||||||||   ||||||||||||  a
   caucgg cg CG CGUUUGUAG   CUGACUUUCgau  a
acu      u  u  U         --C            gc 

Annotation confidence Not enough data

Genome context

AZIM01004649.1: 79018-79101 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-30d

Mature oha-miR-30d-5p

• Accession: MIMAT0036895
• Description: Ophiophagus hannah oha-miR-30d-5p mature miRNA
• Sequence: 15 - UGUAAACAUCCCCGACUGGAAGCU - 38
• Evidence: not_experimental

Mature oha-miR-30d-3p

• Accession: MIMAT0036896
• Description: Ophiophagus hannah oha-miR-30d-3p mature miRNA
• Sequence: 50 - CUUUCAGUCCGAUGUUUGCUGC - 71
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656