miRBase entry: oha-mir-301a

Stem-loop oha-mir-301a

Accession

MI0031448

Description

Ophiophagus hannah oha-mir-301a precursor miRNA

Sequence

cuuuuccugcugacaggaGCUCUGACUUCAUUGCACUACUguaauugccagcuagCAGUGCAAUAGUAUUGUCAAAGCAcuugcaagcagaacc
......(((((..((((.(((.((((..(((((((((.((((........)).)).)))))))).)....)))).))).))))..)))))....

Structure

cuuuuc     ga    a   C    --UU -        A  -  aau 
      cugcu  cagg GCU UGAC    C AUUGCACU CU gu   u
      |||||  |||| ||| ||||    | |||||||| || ||    
      gacga  guuc CGA ACUG    G UAACGUGA ga cg   g
--ccaa     ac    A   A    UUAU A        C  u  acc

Annotation confidence Not enough data

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Genome context

AZIM01007303.1: 17563-17656 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-301a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-301a-5p

Accession	MIMAT0036884
Description	Ophiophagus hannah oha-miR-301a-5p mature miRNA
Sequence	19 - GCUCUGACUUCAUUGCACUACU - 40
Evidence	not_experimental

Mature oha-miR-301a-3p

Accession	MIMAT0036885
Description	Ophiophagus hannah oha-miR-301a-3p mature miRNA
Sequence	56 - CAGUGCAAUAGUAUUGUCAAAGCA - 79
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656