Stem-loop oha-mir-1677b

Accession

MI0031371

Description

Ophiophagus hannah oha-mir-1677b precursor miRNA

Sequence

cuugcugagguccugaACCAAAGCCCCUCGAGGACAAUgugcgucuuucuauUGACUUCAGUGGGCUUAGGAUcaggcccuuaaugcau
..((((((((.(((((.((.((((((((.((((.(((((..........))))).)))))).)))))).)).))))).)))))..))).

Structure

cu   --     u     A  A      -  C    A     ugcg 
  ugc  ugagg ccuga CC AAGCCC CU GAGG CAAUg    u
  |||  ||||| ||||| || |||||| || |||| |||||     
  acg  auucc ggacU GG UUCGGG GA CUUC GUuau    c
-u   ua     c     A  A      U  -    A     cuuu 

Annotation confidence Not enough data

Genome context

AZIM01001067.1: 888654-888742 [-]

Mature oha-miR-1677b-5p

• Accession: MIMAT0036749
• Description: Ophiophagus hannah oha-miR-1677b-5p mature miRNA
• Sequence: 17 - ACCAAAGCCCCUCGAGGACAAU - 38
• Evidence: not_experimental

Mature oha-miR-1677b-3p

• Accession: MIMAT0036750
• Description: Ophiophagus hannah oha-miR-1677b-3p mature miRNA
• Sequence: 53 - UGACUUCAGUGGGCUUAGGAU - 73
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656