miRBase entry: oha-mir-449c

Stem-loop oha-mir-449c

Accession

MI0031471

Description

Ophiophagus hannah oha-mir-449c precursor miRNA

Sequence

gugggaugguuUGGCAGUGUACCUCUUAGUUAGCUguuguacauauuccaGCAACUAAGUACACUUCCAUAuuauugcacaau
(((.((((((.(((.(((((((...((((((.((((............))))))))))))))))).))).)))))).)))...

Structure

---   g      u   C       CUC      A    uugua 
   gug gauggu UGG AGUGUAC   UUAGUU GCUg     c
   ||| |||||| ||| |||||||   |||||| ||||      
   cac uuauuA ACC UCACAUG   AAUCAA CGac     a
uaa   g      U   U       ---      -    cuuau

Annotation confidence Not enough data

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Genome context

AZIM01000175.1: 574995-575077 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-449c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-449c-5p

Accession	MIMAT0036927
Description	Ophiophagus hannah oha-miR-449c-5p mature miRNA
Sequence	12 - UGGCAGUGUACCUCUUAGUUAGCU - 35
Evidence	not_experimental

Mature oha-miR-449c-3p

Accession	MIMAT0036928
Description	Ophiophagus hannah oha-miR-449c-3p mature miRNA
Sequence	51 - GCAACUAAGUACACUUCCAUA - 71
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656