miRBase entry: oha-mir-181c

Stem-loop oha-mir-181c

Accession

MI0031377

Description

Ophiophagus hannah oha-mir-181c precursor miRNA

Sequence

aaaacuaaaaagucacaaucAACAUUCAUUCUGUCGGUGGGUUguuaugcugguggagaagCUCACUGAUCAGUGAAUGCAAcuguggcugaa
..........(((((((.....((((((((..(((((((((((....(.(....).)..))))))))))).))))))))....)))))))...

Structure

aaaacuaaaa       aucAA        CU           guua g u 
          agucaca     CAUUCAUU  GUCGGUGGGUU    u c g
          |||||||     ||||||||  |||||||||||    | |  
          ucggugu     GUAAGUGA  UAGUCACUCga    a g g
-------aag       -cAAC        -C           --ag g u

Annotation confidence Not enough data

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Genome context

AZIM01000021.1: 758696-758788 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-181c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature oha-miR-181c-5p

Accession	MIMAT0036760
Description	Ophiophagus hannah oha-miR-181c-5p mature miRNA
Sequence	21 - AACAUUCAUUCUGUCGGUGGGUU - 43
Evidence	not_experimental

Mature oha-miR-181c-3p

Accession	MIMAT0036761
Description	Ophiophagus hannah oha-miR-181c-3p mature miRNA
Sequence	62 - CUCACUGAUCAGUGAAUGCAA - 82
Evidence	not_experimental

References

PubMed ID: 24297900
The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
"Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
"Proc Natl Acad Sci U S A (2013) 110:20651-20656