Stem-loop oha-mir-181c

Accession

MI0031377

Description

Ophiophagus hannah oha-mir-181c precursor miRNA

Sequence

aaaacuaaaaagucacaaucAACAUUCAUUCUGUCGGUGGGUUguuaugcugguggagaagCUCACUGAUCAGUGAAUGCAAcuguggcugaa
..........(((((((.....((((((((..(((((((((((....(.(....).)..))))))))))).))))))))....)))))))...

Structure

aaaacuaaaa       aucAA        CU           guua g u 
          agucaca     CAUUCAUU  GUCGGUGGGUU    u c g
          |||||||     ||||||||  |||||||||||    | |  
          ucggugu     GUAAGUGA  UAGUCACUCga    a g g
-------aag       -cAAC        -C           --ag g u 

Annotation confidence Not enough data

Genome context

AZIM01000021.1: 758696-758788 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from oha-mir-181c

Mature oha-miR-181c-5p

• Accession: MIMAT0036760
• Description: Ophiophagus hannah oha-miR-181c-5p mature miRNA
• Sequence: 21 - AACAUUCAUUCUGUCGGUGGGUU - 43
• Evidence: not_experimental

Mature oha-miR-181c-3p

• Accession: MIMAT0036761
• Description: Ophiophagus hannah oha-miR-181c-3p mature miRNA
• Sequence: 62 - CUCACUGAUCAGUGAAUGCAA - 82
• Evidence: not_experimental

References

1. PubMed ID: 24297900
   The king cobra genome reveals dynamic gene evolution and adaptation in the snake venom system
   "Vonk FJ, Casewell NR, Henkel CV, Heimberg AM, Jansen HJ, McCleary RJ, Kerkkamp HM, Vos RA, Guerreiro I, Calvete JJ, Wuster W, Woods AE, Logan JM, Harrison RA, Castoe TA, de Koning AP, Pollock DD, Yandell M, Calderon D, Renjifo C, Currier RB, Salgado D, Pl"
   "Proc Natl Acad Sci U S A (2013) 110:20651-20656